PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV93194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 289aa MW: 31744.5 Da PI: 5.6746 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 72.6 | 5.3e-23 | 130 | 184 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr C+++ gC+++k+ve+s+ dp ++ itY+ eHnh+ RWV93194.1 130 SDLWAWRKYGQKPIKGSPYPR----CSTSkGCQARKQVEQSRADPGMLLITYTAEHNHP 184 699***************996....87777****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MGDDNWDLYA VVRGCSAGTV ADVDDSSFSP FPPSLLQERD VGGEKERAFG FPHLVGTSSY 60 PYGLHEFCEP FYAMELHQEP PLLPAVGDPP QSQRQSRQPQ RPVSQAPRST RRKNQQKKVV 120 CQVAAHGVRS DLWAWRKYGQ KPIKGSPYPR CSTSKGCQAR KQVEQSRADP GMLLITYTAE 180 HNHPIPTIRN SLAGSIRPKL PLPTSADGDN RDQLLPPSPL SSPLADSVED DLLLRRPPRQ 240 GEEAAEEEEE DALFLGMDMA TVSSGYSGEK SGFSPWPVSF NATAADMAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 4e-44 | WRKY family protein |