PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV92904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | Whirly | ||||||||
Protein Properties | Length: 238aa MW: 26513.4 Da PI: 10.2969 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 179.8 | 5.3e-56 | 60 | 197 | 2 | 139 |
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlp 100 v+k+kaal+vk+++p++ +lds + + r+Gg++l++ +a+++rkydWekkq+fals+tev++++ l++ esceffhdp++k+s eG+v+k+l++ Pl+ RWV92904.1 60 VFKGKAALSVKPILPDIRELDSRSSRTYRNGGVMLTFWPAVGQRKYDWEKKQVFALSPTEVGSFIGLGPAESCEFFHDPSMKSSLEGQVKKSLSISPLS 158 9************************************************************************************************** PP Whirly 101 dGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 + G+f+n+sv n+++k+ne++svPv+kaef+v+r++l+ RWV92904.1 159 NDNGYFLNISVVNNIQKTNERLSVPVTKAEFTVIRTVLS 197 ************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MSFAIKLLIL CKLASKSILG RAANVKDSYW LNTQHGITTS GPDLVTDGSS SIGRFANYTV 60 FKGKAALSVK PILPDIRELD SRSSRTYRNG GVMLTFWPAV GQRKYDWEKK QVFALSPTEV 120 GSFIGLGPAE SCEFFHDPSM KSSLEGQVKK SLSISPLSND NGYFLNISVV NNIQKTNERL 180 SVPVTKAEFT VIRTVLSYVL PHILGWPRAM RSHQPNTEKK MSKQQGELRP DPSFEWGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 3e-71 | Whirly family protein |