PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV92540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 364aa MW: 39082 Da PI: 10.4654 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 72.7 | 4.8e-23 | 297 | 348 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++prs +gCp++k+ver+ +dp+++++tYegeH h+ RWV92540.1 297 DEYSWRKYGQKPIKGSPYPRS-----VRGCPARKHVERAPDDPTMLIVTYEGEHYHT 348 9*******************6.....89***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MNKCNPALLL GFFPALGRFF FVFLLLRLPS HGGGLGFGVG GVTMAVDLMG YAKMDEQMAI 60 QEAATAGLRS MEHLIFQLSH HHQSPQLDCR EITDLTVSKF KKVISILNRT GHARFRRGPA 120 GPPTEDHPPP RAPLALTLPP AKPPRHLAPP PPPPPPPQAL TFDFTKPVAI GGRSEATGSK 180 YTTESFSIST TMTSATSSFM SSITGDGSVS NGKIVSSSLL PAVVSGAASA GKPPLSSSSS 240 SFKKKKCHEH AHSELLAGKY ALPGGRCHCS KRNRKSRVKR TIRVPAISSK TADIPPDEYS 300 WRKYGQKPIK GSPYPRSVRG CPARKHVERA PDDPTMLIVT YEGEHYHTRG AAPAEPSDVP 360 MAAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 2e-84 | WRKY family protein |