PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV92529.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 331aa    MW: 35718.9 Da    PI: 9.7863
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV92529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.46.5e-171965349
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                i +k    ++fskR+ng++ KA+ LS+LC+++vav++fs+tg+ + +
  RWV92529.1 19 IADKNALFISFSKRKNGVFTKASDLSTLCGTDVAVVVFSPTGRAFSF 65
                566666679*********************************97766 PP

Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MLKRKKTSKG KQKIELQKIA DKNALFISFS KRKNGVFTKA SDLSTLCGTD VAVVVFSPTG  60
RAFSFGSPAV VPIMERFLSG CVFPSFGSPE EQICRRKSIH EKNRQVMELS RQVEAARAAK  120
AELEAQLKTA TQGLEWLQDW DNVTVQQLDE LVKSLELLKT RAQNRWTKLV SIVRPSPPNE  180
GTVAAAVLEG ASGSRMNPML PFRGFTTDDP GPSSSNQPPI VDHAGAPGAG GGMLMGDPRW  240
QGFPPMGLPP ITDYYMDPSA SSSNAITVAG VPGSSGPAGF GVIDPGWPGI QAIMNPVPPA  300
NSVRMVNPYE PVRASLSHAH YCFRTSTIMT Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333KRKKTSKGKQKIELQKIADKNALFISFSKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-22M-type_MADS family protein