PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV92411.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 519aa MW: 56940.2 Da PI: 6.5014

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV92411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.7	1.8e-07	388	452	10	55
HHHHHHHHHHHHHHHCTSCC.C.....................TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPk.as..................kapskKlsKaeiLekAveYIksLq 55 + RR ri +++ +L+el+P+ + + + + +++L +A+ YIk+Lq RWV92411.1 388 QVRRTRISERIRKLQELVPNmDKvsitccnsnsrccrtlmfISTLQQTNTSDMLDLAIGYIKDLQ 452 56****************988**************8888999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MYRSPSLPVS KDLNLPYPSA APFDGHRKQE SSSNINPYDG HHHQEEEEQQ QQQMSSGLLR 60 YRSAPSSMIG QLCDDFLPER TSCLENETLF ARLLAPDLQI RDKLPGSGGG GGAAISQRSP 120 QFTPPHPPPA AFSSQIMFHQ QQKQQHVSSM AMETEQIKNG DADSSSTLPR HNSSPGGLFS 180 HLSVEDGTRS LPCLLQHLNT PSSFALHSAC SLGYPVLRGV AGFRNEDEAD RLRNQISFSS 240 RQNSMMSQIS EVIGGSSPEE SSGGRCYVPG FPTNTWDTSS LFSGRDDGGK TTTDALNPAE 300 LQVTPLDLPL TLLSLRCIIV VLHLGTDWRG EESCRRILGV PGCCPLQDPS QARLCNSSSK 360 CSREGNLLFF FLFSPPERLT HGILLLSQVR RTRISERIRK LQELVPNMDK VSITCCNSNS 420 RCCRTLMFIS TLQQTNTSDM LDLAIGYIKD LQKQVKVFAS AKLNGGSFNQ SSTMFLAMAD 480 SVGGEIHNVL AENGMGIIDK KMDTEGGASF FLFLLVDWS

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MYRSPSLPVS KDLNLPYPSA APFDGHRKQE SSSNINPYDG HHHQEEEEQQ QQQMSSGLLR  60
YRSAPSSMIG QLCDDFLPER TSCLENETLF ARLLAPDLQI RDKLPGSGGG GGAAISQRSP  120
QFTPPHPPPA AFSSQIMFHQ QQKQQHVSSM AMETEQIKNG DADSSSTLPR HNSSPGGLFS  180
HLSVEDGTRS LPCLLQHLNT PSSFALHSAC SLGYPVLRGV AGFRNEDEAD RLRNQISFSS  240
RQNSMMSQIS EVIGGSSPEE SSGGRCYVPG FPTNTWDTSS LFSGRDDGGK TTTDALNPAE  300
LQVTPLDLPL TLLSLRCIIV VLHLGTDWRG EESCRRILGV PGCCPLQDPS QARLCNSSSK  360
CSREGNLLFF FLFSPPERLT HGILLLSQVR RTRISERIRK LQELVPNMDK VSITCCNSNS  420
RCCRTLMFIS TLQQTNTSDM LDLAIGYIKD LQKQVKVFAS AKLNGGSFNQ SSTMFLAMAD  480
SVGGEIHNVL AENGMGIIDK KMDTEGGASF FLFLLVDWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	5e-17	bHLH family protein