PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV91553.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 240aa MW: 26556.3 Da PI: 4.318 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 42 | 92 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 rg+WT++Ed+ l ++++++G g+W++ ar+ g gRt++++k++w++ RWV91553.1 42 RGAWTADEDLVLMNYIALHGEGRWSSLARRAGidsclPGRTDNEIKNYWRT 92 89***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MLPTKDSLIP SHSTSYLEDG HRTSAEAMEF IPQSEEEMEL RRGAWTADED LVLMNYIALH 60 GEGRWSSLAR RAGIDSCLPG RTDNEIKNYW RTRVQKHAKH LHCDVHSKQF EDVLRHLWIP 120 RLVERIQASS GDSPAAAGAE VPTSCDGPVN AIPESAQVKM SPESSSTGGW SSVDSFGLDF 180 LPPPVSNDFG AGMQGGEDGS GANGCWSECG YSELGVPDFD QSIWEDEMWS MEDIWLQQQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 1e-38 | MYB family protein |