PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV91087.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 280aa    MW: 29416.2 Da    PI: 7.0929
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV91087.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26098.37.7e-314107199
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C+++C ++p++      ++q++++ +++k++G++ +l+l++a pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e+
  RWV91087.1   4 SCNGCRVLRKGCNDNCSIRPCLqsiksSESQANATVFLAKFYGRAGLLNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQEAVEA 102
                 6*********************8887666889*****************************************************************99 PP

      DUF260  95 allke 99 
                 +l ++
  RWV91087.1 103 VLKGA 107
                 98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MRMSCNGCRV LRKGCNDNCS IRPCLQSIKS SESQANATVF LAKFYGRAGL LNLINAGPEH  60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQEAV EAVLKGAPIA QIPSEMAASA  120
PAPQLKACDI RHVSKGSGAA RAAADLHKVN KRRSRFKRSG AELAKPAAPL SDFQPTQSHD  180
STASHATEPG PAAAGASGED GECRDSMSSA DTVEEEASHV SQGEPDNAEV VLELTLGFEP  240
MSRPTPSLTG RSGAHRRCDL SAMDTGDCTA DLGLALPAAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.17e-83LBD family protein