PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV91026.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 315aa MW: 34896.8 Da PI: 7.0137

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV91026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.2e-08	14	49	1	37
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 +g+W+ eEd++l+++++ +G g+W + ++ g ++ RWV91026.1 14 KGPWSCEEDQKLIQYIQNHGHGCWIALPKLAG-SLSI 49 79***********************9999999.7765 PP
2	Myb_DNA-binding	23.8	1e-07	120	142	23	46
-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46 +W++Ia++++ gRt++++k+ w++ RWV91026.1 120 RWSSIAAHLP-GRTDNDIKNLWNS 142 7*******.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MGRSPCCDEH ALKKGPWSCE EDQKLIQYIQ NHGHGCWIAL PKLAGSLSIY LLSVTHICND 60 DKVFLLRNAG LNRCVRPTDL PLAFLTPVPD ITWNPNRHEK KRTFIGYEPL PLSSLFSLLR 120 WSSIAAHLPG RTDNDIKNLW NSCLKKKLIR MGIDPVTHRP RAEQLIAVHK EFLERVPWEE 180 EHAARALATL QFLDSLLQPS ATVGISSGNE NSLDSIISTT AIPSLSSFLS PGPSPASNSQ 240 ARHHHHCVPG MSFSIDWPLG SAINEEASFF VLSEEERNGI RTSGVSSPFL LPPLCDVSSY 300 GVSLSPSSLW SDHLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	4e-41	MYB family protein