PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV90998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 173aa MW: 19032.1 Da PI: 4.7638 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.5 | 4.1e-10 | 9 | 31 | 23 | 46 |
-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46 +W++Ia++++ gRt++++k++w++ RWV90998.1 9 RWSKIAQHLP-GRTDNEIKNYWRT 31 6*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 173 aa Download sequence |
MTVGGLRRRW SKIAQHLPGR TDNEIKNYWR TRVQKHAKQL KCDVNSKQFK DVVIYLWIPH 60 LVERIRAASG GVTAPAYENV AVPVTSGQPE NSSTVGSSSL DSLGIQFSPP AVSDGFAAGG 120 TQGGEDNSAD VSQPGEFLPI PDGYADLEFP DFDQGLWGDN LWTVEDVWLQ QQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G49620.1 | 4e-34 | MYB family protein |