PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV90802.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 249aa MW: 27603.2 Da PI: 8.554 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105 | 4e-33 | 70 | 126 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse prsYY+Ct++ Cpvkkkvers d+++ ei+Y+geHnh+k RWV90802.1 70 DGYNWRKYGQKQVKGSESPRSYYKCTHPACPVKKKVERSF-DGQIAEIVYNGEHNHPK 126 9***************************************.***************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MDGCKRSFTD FDQENPDAIR QKPTRNYQQP AVVVEQAKPD YVAGRRQSCS RSDLKNQQQP 60 TGCGDRPSYD GYNWRKYGQK QVKGSESPRS YYKCTHPACP VKKKVERSFD GQIAEIVYNG 120 EHNHPKPLPP RKLSSGSQGQ AFVSDEAGRE AGSNPSWGSS VSEVKVSATS VDEQNEAILA 180 GIPTYAGRVH FSHESFIATT YDSSDNNTDN STHIGKVGSR SRAASMASDK LDCKRRYARH 240 ESSIETDQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37260.2 | 4e-36 | WRKY family protein |