PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV90531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 139aa MW: 14477.6 Da PI: 8.9317 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 114.4 | 7.2e-36 | 44 | 135 | 1 | 91 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 +C aCk+lrrkC ++Cv+a +f++eq p++fa+vhk+FGasnv+kll+++p +++da+ +++yeA+ar+ dPvyG+v++il+lqqq+ +l+ RWV90531.1 44 PCGACKFLRRKCLPGCVFAAHFASEQgPARFAAVHKVFGASNVSKLLSSVPAGRHHDAVVTICYEAQARLADPVYGCVSTILALQQQVFSLS 135 7***********************9999***********************************************************97765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MDPDGGGEKE CGEKPNRRAA RVDAGKRAVA VTPGSPREGA AGPPCGACKF LRRKCLPGCV 60 FAAHFASEQG PARFAAVHKV FGASNVSKLL SSVPAGRHHD AVVTICYEAQ ARLADPVYGC 120 VSTILALQQQ VFSLSLSLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 7e-47 | LBD family protein |