PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV90403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 25867.3 Da PI: 8.2385 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45 | 1.9e-14 | 48 | 94 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+e+E+rRR+riN +++Lr+++P++ +K++Ka+ L ++v+++k+L RWV90403.1 48 IHSEAEKRRRERINAHLSTLRRMIPNS----TTKMDKASLLSRVVDHLKDL 94 59************************8....7*****************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MAECFASSSW SEEGRDGSSC SSLMAPLLLL PGQAKPASEG RDSAASRIHS EAEKRRRERI 60 NAHLSTLRRM IPNSTTKMDK ASLLSRVVDH LKDLKRRARA LDVDRNIPIP AEVNEVDVEF 120 NAGHQHAFPE EEEEEELYIT ASVCCDDRPD LLEELSDAFR RLGLRAVRAD MMTLGGRSRN 180 VFVLFLKDGD RSVCLSSLNR SIREMLGRVA SSGALQSNVF VSRRRKAMRS H |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 91 | 97 | LKDLKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G25710.1 | 5e-26 | bHLH family protein |