PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV90143.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YB | ||||||||
Protein Properties | Length: 171aa MW: 18636.6 Da PI: 6.0817 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 178 | 8.9e-56 | 24 | 119 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal tlGf+dyvep++ yl+kyre+eg++ RWV90143.1 24 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALNTLGFDDYVEPMRRYLHKYREMEGDR 119 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MGGSVESDGH HDCAGSASGD GGIKEQDRLL PIANVGRIMK QILPPNAKIS KEAKETMQEC 60 VSEFISFVTG EASDKCHKEK RKTVNGDDIC WALNTLGFDD YVEPMRRYLH KYREMEGDRA 120 ATTGHSNKAT GSDAGDQDAV GEQHRDQPSP GAHLMFNAME RSHNPSASKG F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 3e-59 | NF-YB family protein |