PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV90067.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 232aa MW: 26120.6 Da PI: 4.3177 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.8 | 5.9e-09 | 10 | 35 | 20 | 47 |
TTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqky 47 G + W+ Ia+ ++ gRt++++k++w++ RWV90067.1 10 GCR-WSQIASQLP-GRTDNEIKNYWNSC 35 767.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MVSGFLTFCG CRWSQIASQL PGRTDNEIKN YWNSCLKKKL RQRGIDPSTH KPLGETESEA 60 QEASRTHLEQ LPLQPVFDPF PLIETQTCLD SVENNVNIYD QFHQSFESSL AQNECYANSG 120 LCEYSSVLDV YGDSSSNSSN WNCNTGAAVK DVVGDEALNW VAQSEVEAPP HVHMNGGEAH 180 EHKFSPWQEK PNVESSEDYS TYSMRFLSFD VAETCFDVHR EALASEFNVD LF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 42 | LKKKLRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 4e-22 | MYB family protein |