PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV89883.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 436aa    MW: 46492.6 Da    PI: 9.3371
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV89883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.69e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+iifs +gkl eys+
  RWV89883.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIIFSAKGKLCEYST 59
                79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIIFSA KGKLCEYSTD  60
SSYQMKSLER NQAPIRSVVH LVVSAFPSYH GERLADGEEE ATAGGRGEDS DGRREEAVAV  120
ADEGCGCGYN FLEEEARAAV EEEVAAVAEG RAEQRWPEEE AAEGEGSDDV RLLRQERRKG  180
RLRQWQQWVE KPQEAEEIRG EAAAMADKVT AVEGRKGGSG GPTRATVAGS DEEAREEGEG  240
SGSPTRAAAA GEGGGYGVSV RSAQRWLRLR AREAVVEVAL AGDKSKQERR GLCAGGVVMR  300
AGSRGGGGLH GVDGEGQRRP VGGGCGHVGC CDRGDGDMVV GAARRGGQPW SAPMQGRPPT  360
ARPQPRPAQG QQPPAVRRPQ RGRLQGDARK WRSPAANPQG ATARDALARG AAAHGQPCRL  420
RRGNGGDGKE RARASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.13e-33MIKC_MADS family protein