PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV89697.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | SBP | ||||||||
Protein Properties | Length: 123aa MW: 12469 Da PI: 9.64 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 74.4 | 1.9e-23 | 76 | 123 | 1 | 48 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +CqvegC+adl+ ak y+ rhkvC +hskap+v+v+gleqrfCqqCsr RWV89697.1 76 RCQVEGCNADLTGAKAYYCRHKVCGMHSKAPKVIVAGLEQRFCQQCSR 123 6**********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MDSSSLKASG ASSGSGDALH GLKFGQKIYF EDGGGGSGSG SSSKPTPASA KDAAAPPPPG 60 RKGKGVAQGG QQQPPRCQVE GCNADLTGAK AYYCRHKVCG MHSKAPKVIV AGLEQRFCQQ 120 CSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 1e-23 | SBP family protein |