PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWV89690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 314aa MW: 34335.4 Da PI: 8.11 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3.1e-08 | 14 | 53 | 1 | 39 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkq 39 +g+W++eEd +l++ + ++G+g +W + +++ gk R+ + RWV89690.1 14 KGPWSPEEDTKLKEFIGKHGTGgNWIALPQKAGKFRSSSH 53 79******************************98888765 PP | |||||||
2 | Myb_DNA-binding | 27.7 | 6.4e-09 | 85 | 109 | 20 | 46 |
TTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46 G +W+ Ia++++ gRt++++k++w++ RWV89690.1 85 GC-RWSIIASHLP-GRTDNDIKNYWNT 109 33.5*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 314 aa Download sequence |
MGRTPCCDKA HVKKGPWSPE EDTKLKEFIG KHGTGGNWIA LPQKAGKFRS SSHSRCFFPF 60 FGQNLHLNPQ KGMLLNPTLS LSSDGCRWSI IASHLPGRTD NDIKNYWNTK LKKKFLGIVS 120 SQKKQQHQLQ QQQHHNLFSS LFSLSQGGCN TNTAPDLELV TGLGEFPSLI SQRIPGFASA 180 STSTAAASAL LQAPYRQPLQ MLERRSSSNT MIAFGNSDPS CNSSGGSCTQ ISYGTELEYD 240 CDIARGFEGA QISIDNYSTY GGLEYDSRSL RPGGGGGHVE TPLDYTYEEI KHLLCSNNSG 300 CNPINNDHNP SLLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57620.1 | 5e-41 | MYB family protein |