PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV89487.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 77aa    MW: 8723.2 Da    PI: 10.7198
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV89487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.58.8e-291059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                ri+n++ rqvtfskRrng+lKKA+EL +LCdaev ++ifsstg+lye+ss
  RWV89487.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLVIFSSTGRLYEFSS 59
                8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MGRGKIVIRR IDNTTSRQVT FSKRRNGLLK KAKELAILCD AEVGLVIFSS TGRLYEFSSS  60
RFSLFLSLAL YHLDLVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.25e-32MIKC_MADS family protein