PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV89475.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YA | ||||||||
Protein Properties | Length: 159aa MW: 17122.6 Da PI: 10.0867 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 38.1 | 4.9e-12 | 128 | 153 | 1 | 26 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRaklee 26 +ep+YVNaKQy++Il+RRq+R+ ++ RWV89475.1 128 EEPVYVNAKQYHGILRRRQSRKVIKV 153 69*******************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MESCPGGTNT NTNTNTADPS VQTALAATIN GQPWLCGPVF AAVGTSKSPS VGNEAGQSQP 60 SDGVADTGDA SKERQNMGTG ACVLLLFISL LKPQKVTKDR SMASNGKMHP QLIRILYSCM 120 PLPLEMTEEP VYVNAKQYHG ILRRRQSRKV IKVRKVRAH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 2e-13 | NF-YA family protein |