PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV89288.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GATA
Protein Properties Length: 380aa    MW: 40917.1 Da    PI: 7.0595
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV89288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA596.2e-19300334135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  RWV89288.1 300 CSHCGAQKTPQWRAGPLGSKTLCNACGVRFKSGRL 334
                 *******************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MEVLGKFGGL QVEEGTMEAL KPRLRMENMY AAQQLLQDQG VSSEEACCVV ERGNSLGEGF  60
AVDDLLNLGE FAEDEMKAEE AEVGGKFETE AGAQHTEPEP CNSYSSPPSS SSALSFELPP  120
PPPLSDIFPA HDAEELEWVS YIIDDSITEF PPPCSGVAPL ARHENRHPRT AAPQGQRPFL  180
LGPSVCAPST EAMAIVKAKR SKRSRSATAA WSKSGPVPFA DTSSLSSADN STTTSAASCS  240
SISFSSPLLV HDQPAGGFDQ SFLINGHHPP PRMKQKPKKR GRKPKVPPST APSAIGERRC  300
SHCGAQKTPQ WRAGPLGSKT LCNACGVRFK SGRLLPEYRP ACSPTFVSHM HSNSHRKVLE  360
MRRKKEEDLI TAAAPPVVSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-39GATA family protein