PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV89288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 380aa MW: 40917.1 Da PI: 7.0595 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 59 | 6.2e-19 | 300 | 334 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+Cg+ kTp+WR gp g+ktLCnaCG+++++ +l RWV89288.1 300 CSHCGAQKTPQWRAGPLGSKTLCNACGVRFKSGRL 334 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MEVLGKFGGL QVEEGTMEAL KPRLRMENMY AAQQLLQDQG VSSEEACCVV ERGNSLGEGF 60 AVDDLLNLGE FAEDEMKAEE AEVGGKFETE AGAQHTEPEP CNSYSSPPSS SSALSFELPP 120 PPPLSDIFPA HDAEELEWVS YIIDDSITEF PPPCSGVAPL ARHENRHPRT AAPQGQRPFL 180 LGPSVCAPST EAMAIVKAKR SKRSRSATAA WSKSGPVPFA DTSSLSSADN STTTSAASCS 240 SISFSSPLLV HDQPAGGFDQ SFLINGHHPP PRMKQKPKKR GRKPKVPPST APSAIGERRC 300 SHCGAQKTPQ WRAGPLGSKT LCNACGVRFK SGRLLPEYRP ACSPTFVSHM HSNSHRKVLE 360 MRRKKEEDLI TAAAPPVVSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66320.2 | 2e-39 | GATA family protein |