PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV88487.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 286aa    MW: 30330.2 Da    PI: 6.0462
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV88487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26099.53.3e-312105199
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e+
  RWV88487.1   2 SCNGCRVLRKGCSENCSIRPCLqwiksPESQANATVFLAKFYGRAGLMNLINAGPDDLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEA 100
                 6*************************************************************************************************9 PP

      DUF260  95 allke 99 
                 +l ++
  RWV88487.1 101 VLKGS 105
                 98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MSCNGCRVLR KGCSENCSIR PCLQWIKSPE SQANATVFLA KFYGRAGLMN LINAGPDDLR  60
PAIFRSLLYE ACGRIVNPIY GSVGLLWSGS WQLCQAAVEA VLKGSPILQI PSETVASIPA  120
PPLKAYDIRH VFKGPGAAAA SKAAAELHKV NKPRSRFKRS GAKPTRAATP PPEFQPARSH  180
ETVASDGTVP LTPSAAAVGE DGECRENESM ASADTAEEAS HVSQGEPQTA EEAEQEEVSL  240
ELTLGLEPAS RSARPTDHET ETRCDVSSWD AVARTSGLGL ALPPPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.16e-80LBD family protein