PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV88384.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 266aa MW: 29780.1 Da PI: 7.9545

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV88384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.9	4e-12	14	73	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT............TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg............kgRtlkqcksrwqkyl 48 +g+WTteEd++l++ G +W+++++ g + R++k+c+ rw +yl RWV88384.1 14 KGPWTTEEDKRLINFMLTNGQCCWRAVPKLAGplfapfiwfnvrLLRCGKSCRIRWTNYL 73 79********************************************************97 PP
2	Myb_DNA-binding	48	2.9e-15	83	133	5	47
-HHHHHHHHHHHHHTTTT.........-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGgg.........tWktIartmgkgRtlkqcksrwqky 47 ++eE++ ++++ qlG++ +W +Ia++++ gRt++++k++w+++ RWV88384.1 83 SEEEEKMVAELHSQLGNNyavaphlptSWFKIASHLP-GRTDNEIKNHWNTH 133 89*********************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MGRQPCCDNV RLKKGPWTTE EDKRLINFML TNGQCCWRAV PKLAGPLFAP FIWFNVRLLR 60 CGKSCRIRWT NYLRPDLKKG LLSEEEEKMV AELHSQLGNN YAVAPHLPTS WFKIASHLPG 120 RTDNEIKNHW NTHIEKKLRK MVIDPFLHKP LIPSASGVPR QEKQQAGALA ERAAEGEVEE 180 YIPSTASDAF LSKSPGFCTD EVPMIQPHEI LASSSISTSS TCSSSTSSSK AAEIQVPCME 240 WPESTYLWGL YDLMDGTSSP IGGMKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16600.1	4e-70	MYB family protein