PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV88017.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 245aa MW: 26599.5 Da PI: 10.519

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV88017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.1	3.2e-13	63	109	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN ++ Lr ++P a Kl+Ka+ L +++ ++k+L RWV88017.1 63 KSHSEAERRRRERINGHLAVLRGMVPCA-----DKLEKAALLAQVISHVKKL 109 68***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MGSVPAGDSG FCRRFPSGLG FEFGSDGSSS SVLLDQERRA PSRLGGKRVG AGILDAKTAM 60 AMKSHSEAER RRRERINGHL AVLRGMVPCA DKLEKAALLA QVISHVKKLK RNAAEINKSC 120 TIPSDADEVR VEVETIAGKL IVRASLCCDD RPEILADLRQ TLSGLHLKPV RAEISTLGGR 180 MKNVLMMTSE GNFSNLDKHL FVASVHQALN SVLDRVNSRE DFLPRTSFAN KRQRISPFAS 240 SSASS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	74	ERRRRE
2	70	110	RRRRERINGHLAVLRGMVPCADKLEKAALLAQVISHVKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	5e-43	bHLH family protein