PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV87635.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 205aa MW: 23002.6 Da PI: 9.8983 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.5 | 1.8e-28 | 31 | 81 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien +nrqvt+skRr+gi+KKA+EL vLCda+v++i+fsstgk+ ey+s RWV87635.1 31 KKIENPTNRQVTYSKRRTGIMKKAKELTVLCDAQVSIIMFSSTGKFSEYCS 81 68***********************************************96 PP | |||||||
2 | K-box | 34.4 | 9.6e-13 | 92 | 124 | 37 | 69 |
K-box 37 hllGedLesLslkeLqqLeqqLekslkkiRskK 69 +++Ge+L+ L++keL+ Leq+L+++lk +R++K RWV87635.1 92 QRMGEGLDGLDMKELRGLEQNLDEALKVVRDRK 124 79******************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MSEANRSGDM RKREGRRELG TEMGRGKIEI KKIENPTNRQ VTYSKRRTGI MKKAKELTVL 60 CDAQVSIIMF SSTGKFSEYC SPTTEYASNP WQRMGEGLDG LDMKELRGLE QNLDEALKVV 120 RDRKVCDLSC ASRVGGKEPR IRLERSAARV VGLRCKSLYS NSNEYPYLNP LSYLLLTIPL 180 HLTTPSVVLV ARRASAAEGC RPCPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 1e-34 | MIKC_MADS family protein |