PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV87501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C2H2 | ||||||||
Protein Properties | Length: 232aa MW: 24948 Da PI: 7.9552 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.9 | 0.0015 | 95 | 117 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F + L H ++H RWV87501.1 95 HRCSVCGKAFGSYQALGGHKSSH 117 79********9999999998887 PP | |||||||
2 | zf-C2H2 | 11.7 | 0.00083 | 145 | 167 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k+F++ L H r+H RWV87501.1 145 HRCSVCLKTFPSGQALGGHKRRH 167 79*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MDLDSARNYP MAVQTLETTV PTAIPLLSAE TSDEELPHIE GWAKRKRSKR FFDHPPTEEE 60 YLAFCLVMLA RGGGSGTHRL PMLAPNSAPA VKLEHRCSVC GKAFGSYQAL GGHKSSHRKP 120 GSGVEEPSAS GSSTASAAFV GGRVHRCSVC LKTFPSGQAL GGHKRRHYDG SLGSGSLEGA 180 SSSHRAFDLN VPTSPDSEFD NVKRWAAAMK EEEEEEVQSS LAFKKPRLLV PA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67450.1 | 2e-40 | C2H2 family protein |