PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87478.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WRKY

Protein Properties

Length: 808aa MW: 87402.5 Da PI: 6.4764

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.2	2.5e-31	395	452	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+ +C+vkkkvers+ ++ ++ei+Y+geHnh+k RWV87478.1 395 EDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCQVKKKVERSQ-EGYFTEIIYKGEHNHPK 452 8**************************************.*************85 PP
2	WRKY	63.7	3e-20	609	659	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++pr C C+v+k+ver+a+d k v++tYeg+Hnh+ RWV87478.1 609 LDDGYRWRKYGQKVVKGNPNPR----C----CNVRKHVERAAHDLKSVITTYEGKHNHD 659 59*****************8....4....*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence
MQGDVSSPRA GRKNRPRATD RTMSAEIQVL LFFFLPPSAK IARNWSTTVE IDHYQSISRG 60 NGQKQPLPVG TTGSGRSAYR STGGLARIAR YGALLPVEEK KLNATYIITV ARKLGCSVFL 120 LPEDIIEAFQ RNGIASANRP CSEKLDPVSV VTSYGSVPLS FDGWTAVARP RGIASTCTAP 180 RIESITGGMD DKTAMMEDWT LPNPSPRTLI SNLLNEEFGS RSFSDFLAGK EIETPPSGPE 240 TEKVDRITKV EEGGASNDHP LEPNWSGAHK LNSHGGLAER MAASGFNVPK LNTARIGQAN 300 MAASSSGVAP DFGQPQTLSS MRVSIQSGTL KETGTTETGT THFLNQQEFN LQESKDAIPD 360 SFMSSDRSLP LDDQQDGDRD LRGELSSVAV GAPAEDGYNW RKYGQKQVKG SEYPRSYYKC 420 THLNCQVKKK VERSQEGYFT EIIYKGEHNH PKPPPNRRSG VLSSNPFNDA EIDGSDQPGS 480 QMATDSKSMW VGTNMGNEGH DWQGDNLEAA SSAHVTAECC DPSTAMQQRP DGPRLCSDAI 540 DVSSTMSSGE DEDDRVTHGS ASLGCDGEGD ETESKRPKLD TSAIEMNAAS RAVREPRVVV 600 QTTSEVDILD DGYRWRKYGQ KVVKGNPNPR CCNVRKHVER AAHDLKSVIT TYEGKHNHDV 660 PAARNSGHPS SSPSNTTLNA APQPHGLPPR AESTQGGLVR FEGHAPLGTF GLPGMEQLRP 720 PTSFSFVMGQ PGLMNLAMAG FGPLAPTKMS VPPSVHSYIG HGPPVEGLMI PKGEPIEEPM 780 PESRLPMPNG GPIYHQMTMN GVPLRPQL

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence

MQGDVSSPRA GRKNRPRATD RTMSAEIQVL LFFFLPPSAK IARNWSTTVE IDHYQSISRG  60
NGQKQPLPVG TTGSGRSAYR STGGLARIAR YGALLPVEEK KLNATYIITV ARKLGCSVFL  120
LPEDIIEAFQ RNGIASANRP CSEKLDPVSV VTSYGSVPLS FDGWTAVARP RGIASTCTAP  180
RIESITGGMD DKTAMMEDWT LPNPSPRTLI SNLLNEEFGS RSFSDFLAGK EIETPPSGPE  240
TEKVDRITKV EEGGASNDHP LEPNWSGAHK LNSHGGLAER MAASGFNVPK LNTARIGQAN  300
MAASSSGVAP DFGQPQTLSS MRVSIQSGTL KETGTTETGT THFLNQQEFN LQESKDAIPD  360
SFMSSDRSLP LDDQQDGDRD LRGELSSVAV GAPAEDGYNW RKYGQKQVKG SEYPRSYYKC  420
THLNCQVKKK VERSQEGYFT EIIYKGEHNH PKPPPNRRSG VLSSNPFNDA EIDGSDQPGS  480
QMATDSKSMW VGTNMGNEGH DWQGDNLEAA SSAHVTAECC DPSTAMQQRP DGPRLCSDAI  540
DVSSTMSSGE DEDDRVTHGS ASLGCDGEGD ETESKRPKLD TSAIEMNAAS RAVREPRVVV  600
QTTSEVDILD DGYRWRKYGQ KVVKGNPNPR CCNVRKHVER AAHDLKSVIT TYEGKHNHDV  660
PAARNSGHPS SSPSNTTLNA APQPHGLPPR AESTQGGLVR FEGHAPLGTF GLPGMEQLRP  720
PTSFSFVMGQ PGLMNLAMAG FGPLAPTKMS VPPSVHSYIG HGPPVEGLMI PKGEPIEEPM  780
PESRLPMPNG GPIYHQMTMN GVPLRPQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-107	WRKY family protein