PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87352.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 453aa MW: 49273.5 Da PI: 6.6318

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.9	6.1e-10	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g W++eEde+l++ ++++G g+W+++++ g RWV87352.1 14 KGLWSPEEDEKLIKHIAKYGHGCWSSVPKQAG 45 678**************************988 PP
2	Myb_DNA-binding	48.4	2.1e-15	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++++++ lG++ W++Ia++++ gRt++++k+ w++ RWV87352.1 93 RGTFSQQEEDLIIELHAVLGNR-WSKIAAHLP-GRTDNEIKNLWNS 136 899*****************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MGGHSCCYKQ KLRKGLWSPE EDEKLIKHIA KYGHGCWSSV PKQAGTVPVN SASPSAEMMV 60 IIASHSPQIS GLQRCGKSCR LRWINYLRPD LKRGTFSQQE EDLIIELHAV LGNRWSKIAA 120 HLPGRTDNEI KNLWNSCIKK KLRQRGIDPN THKPLAEVEG GDDDDKPPSN GEKNSSSSGL 180 QFPASPANAK LAAKELTPST SAVDKPLDES TTPKGSSMPT KELFLDQLLA NHESTLTCRS 240 SISMGCFPLP QLSLAPDFCS NPTTLAALPM SSNPLLWLNH TATQYDVNPE LNCGIARSTD 300 APSLSTTILS TSMVLPPSCA GDDTISNWYA GNCDSSRRSM VNDGASMALQ SSCSFDSGIS 360 AWSDLTPDKD VQVQLGEDNL DLKWSEYLHG AFPVTAAVQA QCQPLYPDIK RGGQFAINGL 420 STWHQSPQLQ QQSQASDIYP KDFHSVSMGF GQI

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MGGHSCCYKQ KLRKGLWSPE EDEKLIKHIA KYGHGCWSSV PKQAGTVPVN SASPSAEMMV  60
IIASHSPQIS GLQRCGKSCR LRWINYLRPD LKRGTFSQQE EDLIIELHAV LGNRWSKIAA  120
HLPGRTDNEI KNLWNSCIKK KLRQRGIDPN THKPLAEVEG GDDDDKPPSN GEKNSSSSGL  180
QFPASPANAK LAAKELTPST SAVDKPLDES TTPKGSSMPT KELFLDQLLA NHESTLTCRS  240
SISMGCFPLP QLSLAPDFCS NPTTLAALPM SSNPLLWLNH TATQYDVNPE LNCGIARSTD  300
APSLSTTILS TSMVLPPSCA GDDTISNWYA GNCDSSRRSM VNDGASMALQ SSCSFDSGIS  360
AWSDLTPDKD VQVQLGEDNL DLKWSEYLHG AFPVTAAVQA QCQPLYPDIK RGGQFAINGL  420
STWHQSPQLQ QQSQASDIYP KDFHSVSMGF GQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.2	2e-85	MYB family protein