PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87309.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 283aa MW: 32411.5 Da PI: 5.1251

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.8	1.8e-18	34	87	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k RWV87309.1 34 KKRRLNMEQVRVLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 87 456899***********************************************9 PP
2	HD-ZIP_I/II	129.6	1.2e-41	33	123	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdye Lkr+++a+++ene+L++++++L++e+ RWV87309.1 33 EKKRRLNMEQVRVLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYELLKRQFEAMRSENEALQSQNKKLQAEV 123 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MLGRRSMSFS GIENGEGMNG EDELSDDGMQ TGEKKRRLNM EQVRVLEKNF ELGNKLEPER 60 KMQLARALGL QPRQVAIWFQ NRRARWKTKQ LEKDYELLKR QFEAMRSENE ALQSQNKKLQ 120 AEVCMASIYS TLVLVSTRSG SNYAMFEVFE EDFSLAVIGP DTYLFLAMQI MALKGRETSE 180 LINLNKETEA SCSNRSENSS EINLDISRTS VTESALHLHQ SLPFFQSIRP ADIDQLLQST 240 SRPDMQCPKI ENGVTEGSFS NLLCSMEDQS ASFWSWSDHH NFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	90	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	5e-75	HD-ZIP family protein