PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV87203.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 203aa MW: 24366.5 Da PI: 10.2802 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.1 | 1.5e-48 | 14 | 176 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....................................kvkaeekewyfFsk 63 lppGfrFhPtd elv++yL++kv gk++++ e+i+ev++yk+ PwdL+ ++++++ ewyfF++ RWV87203.1 14 LPPGFRFHPTDVELVSFYLRRKVMGKPFRF-EAIAEVELYKFAPWDLRGilpslllfsylicfdrhryhftffsylvkfiraeksQLRSKDLEWYFFCP 111 79***************************9.89**************856899************************999888665666777******* PP NAM 64 rdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 rdkky++g+r+nrat+ gyWkatgkd+++++ ++++vg+kktL+f++g+ pkg++tdWvm eyrle RWV87203.1 112 RDKKYPNGSRSNRATDIGYWKATGKDRPIIH-NTSTVGMKKTLIFHEGKPPKGNRTDWVMYEYRLE 176 *******************************.9999****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
IDRKLFILMA KTSLPPGFRF HPTDVELVSF YLRRKVMGKP FRFEAIAEVE LYKFAPWDLR 60 GILPSLLLFS YLICFDRHRY HFTFFSYLVK FIRAEKSQLR SKDLEWYFFC PRDKKYPNGS 120 RSNRATDIGY WKATGKDRPI IHNTSTVGMK KTLIFHEGKP PKGNRTDWVM YEYRLENREM 180 ADARLVQVRL ISYTYEMNLV MIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.3 | 1e-58 | NAC family protein |