PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV87076.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 75aa    MW: 8502.88 Da    PI: 11.031
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV87076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.25.9e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien++ rqvtfskRr g+lKKA ELSvLCd+eva+iifss+gkl+ +ss
  RWV87076.1  9 KRIENTTSRQVTFSKRRSGLLKKALELSVLCDVEVALIIFSSRGKLHQFSS 59
                79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MVRGKTQMKR IENTTSRQVT FSKRRSGLLK KALELSVLCD VEVALIIFSS RGKLHQFSSS  60
RFTDFGLQFC SSSVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.11e-32MIKC_MADS family protein