PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86911.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 273aa MW: 30396.5 Da PI: 4.932

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125.8	2.1e-39	32	131	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkC++dC lapyfpa+q++kf n+h+lFG+sn+lk++++l++ ++ +am++++y++++ra dPv G++++i++l+ q+e+ ++elal+ + RWV86911.1 32 ACAACKYQRRKCNPDCSLAPYFPANQQHKFLNAHRLFGVSNILKIIRNLDPYQHAEAMKTIIYQSDMRALDPVGGCYRIIRDLEYQIERDSNELALVLR 130 7*********************************************************************************************98865 PP DUF260 100 e 100 + RWV86911.1 131 Q 131 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MIAGTASHTT TTKASSSSST TSSSSQATAT QACAACKYQR RKCNPDCSLA PYFPANQQHK 60 FLNAHRLFGV SNILKIIRNL DPYQHAEAMK TIIYQSDMRA LDPVGGCYRI IRDLEYQIER 120 DSNELALVLR QLAVCRAQAA QASVASDLDV HPNLLLNTAA SEDVDNVIYG GNIFPTINQQ 180 DQQQYYNYLC YDDDITRDHQ NNHPNTSILI NNNNNNNNDN NDLSSLQHQP HFNCMVEDED 240 VKPLVDMFDV RQPSIGGDED NADEPGGPPR CSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	2e-39	LBD family protein