PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86761.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-YC

Protein Properties

Length: 262aa MW: 28775.4 Da PI: 6.2262

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176	3.8e-55	72	176	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+++df+nh+lPlarikki+kadedv+misaeaPv+++kacelfileltlr+w+h+eenkrrtl+k+di+aavtrtdifdflvdiv RWV86761.1 72 QLQAFWANQtleIEQTSDFRNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACELFILELTLRAWIHTEENKRRTLQKNDISAAVTRTDIFDFLVDIV 170 89*****9999********************************************************************************** PP NF-YC 97 prdelk 102 prdelk RWV86761.1 171 PRDELK 176 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MGTVTGAQIG YAAPTYQPAS IVTGAPAVAG TLPTPPTSAF TTNQTQLASQ HHVAYQQVQQ 60 FHHQQQQHQQ QQLQAFWANQ TLEIEQTSDF RNHSLPLARI KKIMKADEDV RMISAEAPVV 120 FAKACELFIL ELTLRAWIHT EENKRRTLQK NDISAAVTRT DIFDFLVDIV PRDELKDDGL 180 GILRAALPTV GGSADSVPYY YVSAQNQVPG AGVIMGKAVD QTAASAAYAA QQPHSVAYMW 240 QLPPAQQPQP QPQLHQPMPE SD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	151	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	3e-73	NF-YC family protein