PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV86724.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 163aa MW: 18887.8 Da PI: 9.2808 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.6 | 4e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqv+f+kRr g+lKKA+ELSvLCdaeva+i+fs +g+l+e++s RWV86724.1 9 KRIENKINRQVSFAKRRCGLLKKAHELSVLCDAEVALIVFSAHGRLFEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 21 | 1.4e-08 | 102 | 135 | 65 | 98 |
K-box 65 iRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++++l+q+ +l++ke+elq++nk+Lr+k+ RWV86724.1 102 SSEAQMQIMLDQLYDLKNKEQELQKDNKNLRRKV 135 56889***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MGRGKVELKR IENKINRQVS FAKRRCGLLK KAHELSVLCD AEVALIVFSA HGRLFEFCST 60 SRYICAHVRP WLEAPLLYLV SMLKTIERYQ MFRNNAESIP TSSEAQMQIM LDQLYDLKNK 120 EQELQKDNKN LRRKVLSSQS CTAPSNDDEG AARDDDRLIP RWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03710.3 | 3e-36 | MIKC_MADS family protein |