PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV86575.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 100aa MW: 10884.7 Da PI: 10.4596 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 102 | 2.1e-32 | 48 | 97 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+nrqvtf+kRrng+lKKA+ELSvLCdaevavi+fss+gklye++s RWV86575.1 48 RIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVAVIVFSSRGKLYEFCS 97 8***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MLITCAARCV GGTSGGRVDA WFEGHCTFLG GPGRGGIAMG RGRVELRRIE NKINRQVTFA 60 KRRNGLLKKA YELSVLCDAE VAVIVFSSRG KLYEFCSGSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.3 | 4e-32 | MIKC_MADS family protein |