PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86304.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 363aa MW: 40171.1 Da PI: 6.6709

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.3	1.1e-10	14	52	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g W++eEde+l++ ++++G g+W+++++ g ++rw +y RWV86304.1 14 KGLWSPEEDEKLLNHITKYGHGCWSSVPKLAG--------RLRWINY 52 678****************************9........7777777 PP
2	Myb_DNA-binding	51.3	2.7e-16	59	102	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l+v++++ lG++ W++Ia++++ gRt++++k++w++ RWV86304.1 59 RGTFSQQEEDLIVELHAVLGNR-WSRIASRLP-GRTDNEIKNFWNS 102 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGRHACCFKQ KLRKGLWSPE EDEKLLNHIT KYGHGCWSSV PKLAGRLRWI NYLRPDLKRG 60 TFSQQEEDLI VELHAVLGNR WSRIASRLPG RTDNEIKNFW NSCVKKKLKQ SGIDPDTHKP 120 LNEADGGEDR RATGNSDKSS ESGEPKLAPP ASENPEHAVL RPIAPSMPML ERNQIGRSMA 180 ATEELGLPGS VESSSLSGSM SYIALQHASR GSNCDILNQN MPLWFAQNCR LPEMIPELSY 240 NAPSTPSTSV ELKPMPAGLP PDASSLLPFQ YFEACNTSNS SASSGNSSNG VELQSYSPFL 300 DNGIFPWAEL LTNEGAEIHL EGEPEDLKWS EYLNGTIRLT DTIKKQSRCP YGISKGEKHT 360 AIH

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGRHACCFKQ KLRKGLWSPE EDEKLLNHIT KYGHGCWSSV PKLAGRLRWI NYLRPDLKRG  60
TFSQQEEDLI VELHAVLGNR WSRIASRLPG RTDNEIKNFW NSCVKKKLKQ SGIDPDTHKP  120
LNEADGGEDR RATGNSDKSS ESGEPKLAPP ASENPEHAVL RPIAPSMPML ERNQIGRSMA  180
ATEELGLPGS VESSSLSGSM SYIALQHASR GSNCDILNQN MPLWFAQNCR LPEMIPELSY  240
NAPSTPSTSV ELKPMPAGLP PDASSLLPFQ YFEACNTSNS SASSGNSSNG VELQSYSPFL  300
DNGIFPWAEL LTNEGAEIHL EGEPEDLKWS EYLNGTIRLT DTIKKQSRCP YGISKGEKHT  360
AIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G57560.1	1e-75	MYB family protein