PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV86161.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 365aa    MW: 41725.4 Da    PI: 5.6561
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV86161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.34.8e-07424526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                lC++far GtC  G  C F+H+
  RWV86161.1  4 LCKYFAR-GTCLKGVYCEFSHD 24
                9******.*************5 PP
2zf-CCCH26.79.6e-093252526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                 C+f++r G C yG+rC+++H+
  RWV86161.1 32 VCNFYQR-GLCTYGSRCRYNHV 52
                5**9999.*************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
PRILCKYFAR GTCLKGVYCE FSHDWRDQSN NVCNFYQRGL CTYGSRCRYN HVGVSSHNSY  60
DPASSISHQS YHVESSSSQV AHPSRASLNG ETSQAYRIPV DLPVSCQSHT PPLEHAQKQK  120
HGADISPTNE DKKEEHITMC QKNNDLRETT KCSQEIECSI CLERVLSKPT DAERKFGILS  180
ECDHPFCISC IRNWRRNSPA SGIDLDTALR ACPVCRKHSY FVVPSVTWFT TKEEKQEIIT  240
SYKDNLKLID CKYFDFGNGT CPFGASCFYK HTYKPHANRG SAYKPHRYRP HPHRSRQTLE  300
GEEIEDIINP FALEDELADL AALLDVDEEE SEDLDEEDFG SLLLMQMSFL LVHMDDEELL  360
SDDDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.12e-88C3H family protein