PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV86150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 58aa MW: 6324.46 Da PI: 11.5672 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 67 | 1.9e-21 | 10 | 45 | 2 | 37 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevav 37 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v RWV86150.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGV 45 8*********************************77 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 58 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVPLLVG LATRSEAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14210.1 | 2e-25 | MIKC_MADS family protein |