PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV85464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 177aa MW: 19552.3 Da PI: 8.3341 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 111.3 | 6.9e-35 | 7 | 99 | 1 | 92 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkC+++Cv+apyf+ eq +++fa++hk+FGasn +kll +l ++r++a+ ++ yeA ar++dPvyG+v++i++lqqq++++ + RWV85464.1 7 PCGACKFLRRKCVRGCVFAPYFCYEQgAAHFAAIHKVFGASNASKLLLQLLVSDRPEAALTISYEAPARLQDPVYGCVSHIFALQQQVSNSTS 99 7*************************89************************************************************98775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MTGFGSPCGA CKFLRRKCVR GCVFAPYFCY EQGAAHFAAI HKVFGASNAS KLLLQLLVSD 60 RPEAALTISY EAPARLQDPV YGCVSHIFAL QQQVSNSTSN CRRFLFDTNR DPLSASSRRH 120 ESPTHVVPPR RGSVFSTVSP SPLLIHYRRQ LSCAMASSLD VQDDAWSPAC HDMEELL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58190.1 | 3e-54 | LBD family protein |