PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV84961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 137aa MW: 13628.5 Da PI: 9.7378 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 120.8 | 7.7e-38 | 44 | 136 | 1 | 92 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkC ++C++apyf aeq +++fa+vhk+FGasn +kll ++p ++r+da+ +++yeA+ar+rdPvyG+v++i++lqqq+++ k+ RWV84961.1 44 PCGACKFLRRKCMAGCIFAPYFDAEQgAARFAAVHKVFGASNASKLLLHIPAHKRHDAVITICYEAQARLRDPVYGCVAHIFALQQQVHTPKQ 136 7***********************9989************************************************************98665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MSGNVSPSMR VGGGGSGSVG GGLGGGGGGG GGGGGGGGGG GFGPCGACKF LRRKCMAGCI 60 FAPYFDAEQG AARFAAVHKV FGASNASKLL LHIPAHKRHD AVITICYEAQ ARLRDPVYGC 120 VAHIFALQQQ VHTPKQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45420.1 | 7e-52 | LBD family protein |