PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV84864.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 180aa MW: 20232.3 Da PI: 9.2387 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.6 | 4.5e-11 | 79 | 115 | 1 | 39 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 +g W++eEde+l + ++++G g+W+++++ g + ++ + RWV84864.1 79 KGLWSPEEDEKLMRHITKYGHGCWSSVPKQAG-NACR-H 115 678*****************************.6655.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MALPHLPWSW AELGPTSPRQ GPRPFTTGPE CSFRNVLPSP WPSLDSDASF GVADTSAGRP 60 LFLVGMGRQS CCYKQKLRKG LWSPEEDEKL MRHITKYGHG CWSSVPKQAG NACRHCQFNQ 120 NMPSPLPLVL RCAILSGLER CGKSCRLRWI NYLRPDLKRG TFSEQEQSLI IELHAVLGNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.2 | 5e-54 | MYB family protein |