PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV84825.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB
Protein Properties Length: 326aa    MW: 37217.7 Da    PI: 6.8725
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV84825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.9e-1861108148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+WT +Ed++l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
       RWV84825.1  61 RGPWTVDEDLILINYIATHGEGQWNSLARCAGLRRTGKSCRLRWLNYL 108
                      89********************************************97 PP
2Myb_DNA-binding53.17.3e-17114157146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
       RWV84825.1 114 RGNITPEEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 157
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MSRIHPNPPL KFSHSRFLRL QSLISLSLQL DPLEDSYRRL QESMEFHEST PQSEEEMDLR  60
RGPWTVDEDL ILINYIATHG EGQWNSLARC AGLRRTGKSC RLRWLNYLRP DVRRGNITPE  120
EQLLILELHS RWGNRWSKIA QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSRQFKDVMR  180
YLWMPRLVER IRASSGNQVT STPHENATVP MTCALQPIQV PELARVKLSP QNSSTAGPSS  240
SFSSSSSDSP GVQFSPPRVS DGYFGSTTGG DDNNGDVIQT GECTGSWWES LPSPGGDTVL  300
GFPELDQITW GESLWSVEDI WLQQQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.11e-86MYB family protein