PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV84755.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 341aa MW: 37984.3 Da PI: 8.3988

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV84755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.7	9.7e-12	14	46	1	36
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRt 36 +g+WT+eEd +l+d+++++G g+W+t +++ g t RWV84755.1 14 KGPWTPEEDRKLIDYIQKHGQGSWRTLPKKAG---T 46 79****************************99...3 PP
2	Myb_DNA-binding	53.5	5.3e-17	96	139	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w++ RWV84755.1 96 RGRFSFEEEEAIIQLHSVLGNK-WSKIAACLP-GRTDNEIKNYWNT 139 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MGRASCCDKI GVKKGPWTPE EDRKLIDYIQ KHGQGSWRTL PKKAGTGIEI ERRRKLMVSG 60 NLMCSFDVVM YGTGLARCGK SCRLRWTNYL RPDIKRGRFS FEEEEAIIQL HSVLGNKWSK 120 IAACLPGRTD NEIKNYWNTC IRKRLLRMGI DPVTHAPRLD LLDLSSFLTA SLCNPASQFD 180 FSRLLVGPET IANTHQLKMA TDLLSSQRQS SNILGQGLQE QPYLLASLQE QQLQLSSQQL 240 STCTLPNEPF IDEALLMQAS AGQFQPTADS NRWTSASYQS LDPSFTPLVT ETSNLIATDG 300 QGYDLTSLLS TPASSSLNSS STYGNQLKYQ IPSLLDVSKC M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	2e-86	MYB family protein