PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV84624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 219aa MW: 25191.3 Da PI: 4.5999 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155 | 3.3e-48 | 1 | 112 | 7 | 128 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105 FhPtdeelv++yLk+k++g k+el ++i+evd+yk+ePw+L ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v+s +++++g+kkt RWV84624.1 1 FHPTDEELVNYYLKRKIHGLKIEL-DIIPEVDLYKCEPWELA--------EWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVCS-QSRAIGMKKT 89 9***********************.99**************5........8*************************************.999******* PP NAM 106 LvfykgrapkgektdWvmheyrl 128 Lv+y+grap+g +tdWvmheyrl RWV84624.1 90 LVYYRGRAPQGIRTDWVMHEYRL 112 *********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
FHPTDEELVN YYLKRKIHGL KIELDIIPEV DLYKCEPWEL AEWYFFGPRD RKYPNGFRTN 60 RATRAGYWKS TGKDRRVCSQ SRAIGMKKTL VYYRGRAPQG IRTDWVMHEY RLDDKECEDT 120 MGFQDSYALC RVFKKNVICT EVEEQAQCSI ILGESSQGVV VAAEYETTSP DMPVGSSSCV 180 EEEDKDDAWM QFITDDAWCS TLPSNEGGEE PSCVAIVNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 1e-108 | NAC family protein |