PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV84243.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 466aa MW: 52021.5 Da PI: 8.9326

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV84243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	7.7e-18	22	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l +avkq+ g++Wk+Ia+ ++ gRt+ qc +rwqk+l RWV84243.1 22 KGGWTNEEDAILSRAVKQFDGRNWKRIAEAFP-GRTDIQCLHRWQKVL 68 688***************************.**********986 PP
2	Myb_DNA-binding	61.7	1.6e-19	74	120	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde ++++v+++G ++W+ Ia+ ++ gR +kqc++rw+++l RWV84243.1 74 KGSWTKEEDECIIKLVAKHGCKRWSIIAKSLP-GRIGKQCRERWYNHL 120 799***************************.***********97 PP
3	Myb_DNA-binding	45.1	2.3e-14	126	168	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l+ ++++G++ W+ Ia+++ gR ++++k++w+ RWV84243.1 126 KDAWTPEEEVTLIYSHQKYGNK-WAEIAKHLH-GRAENSIKNHWN 168 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MIVVFSPYIF RKISGPTRRS TKGGWTNEED AILSRAVKQF DGRNWKRIAE AFPGRTDIQC 60 LHRWQKVLNP ELVKGSWTKE EDECIIKLVA KHGCKRWSII AKSLPGRIGK QCRERWYNHL 120 NPAIKKDAWT PEEEVTLIYS HQKYGNKWAE IAKHLHGRAE NSIKNHWNCS LKKKLASYLS 180 SKSFDQPSGV IALNLEDCIP KVGCIEADSS EQGILGIGSR QNPSKGALDA SLRPLLGDES 240 RCFRVNNQSM TLEDSRFLDI EMRVISARCK HMTEVNNSTR HLNFSIDESP GATAQTAMSC 300 SSCVRSCHES DTWHIDGSAR GNASDLQNCP TIQSKTYPSS SNHFCSDDHS YTDKTNIPGS 360 GFSNSDGGCQ SDLVPGTYRL HMHVKDVMVS TSSEERAASN GHIRQNHSTG ECSTPPSHPQ 420 SPASVPVSPA SFLRSAAKSF NNTPSILRKR KHESSKQLFV DCFNKK

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MIVVFSPYIF RKISGPTRRS TKGGWTNEED AILSRAVKQF DGRNWKRIAE AFPGRTDIQC  60
LHRWQKVLNP ELVKGSWTKE EDECIIKLVA KHGCKRWSII AKSLPGRIGK QCRERWYNHL  120
NPAIKKDAWT PEEEVTLIYS HQKYGNKWAE IAKHLHGRAE NSIKNHWNCS LKKKLASYLS  180
SKSFDQPSGV IALNLEDCIP KVGCIEADSS EQGILGIGSR QNPSKGALDA SLRPLLGDES  240
RCFRVNNQSM TLEDSRFLDI EMRVISARCK HMTEVNNSTR HLNFSIDESP GATAQTAMSC  300
SSCVRSCHES DTWHIDGSAR GNASDLQNCP TIQSKTYPSS SNHFCSDDHS YTDKTNIPGS  360
GFSNSDGGCQ SDLVPGTYRL HMHVKDVMVS TSSEERAASN GHIRQNHSTG ECSTPPSHPQ  420
SPASVPVSPA SFLRSAAKSF NNTPSILRKR KHESSKQLFV DCFNKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	5e-78	MYB family protein