PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV83840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 118aa MW: 13176.1 Da PI: 9.2217 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.3 | 4.2e-19 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l RWV83840.1 30 KGPWTSAEDAILVDYVKKHGEGNWNAVQKHTGLSRCGKSCRLRWANHL 77 79******************************************9996 PP | |||||||
2 | Myb_DNA-binding | 28.7 | 3e-09 | 83 | 112 | 1 | 31 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartm 31 +g++T+eE++l++++++++G++ W++ a+++ RWV83840.1 83 KGAFTPEEEQLIIELHAKMGNK-WARMAAYV 112 799*******************.****9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
MIPKDQIDSP SIEEGNSSGS LNGGDQLLKK GPWTSAEDAI LVDYVKKHGE GNWNAVQKHT 60 GLSRCGKSCR LRWANHLRPN LKKGAFTPEE EQLIIELHAK MGNKWARMAA YVSLIFFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.1 | 4e-52 | MYB family protein |