PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV83758.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 156aa    MW: 17215 Da    PI: 11.0583
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV83758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF27.93e-092472149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ie+   r v f k r+  +  A  L++ ++a++ +i+fs++g+l+++
  RWV83758.1 24 KKIEDRALRRVVFNKLRKDFFSMAAKLCTTTGARIDIIVFSPSGRLFTF 72
                68**********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MESSLVATAK KKGTSQGKQK IPIKKIEDRA LRRVVFNKLR KDFFSMAAKL CTTTGARIDI  60
IVFSPSGRLF TFGGPSVAAA LRAFLLDSLR RPTEPEEVLR RVGAKEALQR RLEKLRTLAI  120
ARAHELARAR EEAEAASKTT DVDPVTATPD DIPARD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.16e-17M-type_MADS family protein