PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83684.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

RAV

Protein Properties

Length: 354aa MW: 39644.7 Da PI: 9.2685

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	40.1	9.2e-13	58	106	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV + +grW A+I++ ++r++lg+f ++eAa+a++ a ++++g RWV83684.1 58 SRYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEDEAARAYDVAVQRFRG 106 78**9888.8*****3.....5******99**********998 PP
2	B3	93.2	1.9e-29	185	277	1	87
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+ tpsdv+k++rlv+pk++ae+h g + + l++ed g+ W+++++y+ +s++yvltkGW++Fvk++gL++gD+++F+++ RWV83684.1 185 FDKAVTPSDVGKLNRLVIPKQHAEKHfplqqaGAAAFNAVLLSFEDACGKLWRFRYSYWSSSQSYVLTKGWSRFVKEKGLRAGDVLTFQRSTA 277 89***********************88876444448899**********************************************6543 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MEISSLEEAC SEAEKQSPPP SPQPPPVPVG LQRLGSGTSV VLDLEVSVEA ESRKLPSSRY 60 KGVVPQPNGR WGAQIYEKHQ RVWLGTFNEE DEAARAYDVA VQRFRGRDAV TNFKPLVEAD 120 GNDAAEELSF LNSHSKAEIV DMIRKHTYHD ELHQSSRTAR ADRRHNPPHG ATEEWLSGPH 180 REHLFDKAVT PSDVGKLNRL VIPKQHAEKH FPLQQAGAAA FNAVLLSFED ACGKLWRFRY 240 SYWSSSQSYV LTKGWSRFVK EKGLRAGDVL TFQRSTAPEK LLFIDRKTRA LGRHAAAGVQ 300 APRLPVEVVR LFGVDIVKMP VAVANDVTEG NGVDWNGKRT RDMELVSSRE LLRK

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MEISSLEEAC SEAEKQSPPP SPQPPPVPVG LQRLGSGTSV VLDLEVSVEA ESRKLPSSRY  60
KGVVPQPNGR WGAQIYEKHQ RVWLGTFNEE DEAARAYDVA VQRFRGRDAV TNFKPLVEAD  120
GNDAAEELSF LNSHSKAEIV DMIRKHTYHD ELHQSSRTAR ADRRHNPPHG ATEEWLSGPH  180
REHLFDKAVT PSDVGKLNRL VIPKQHAEKH FPLQQAGAAA FNAVLLSFED ACGKLWRFRY  240
SYWSSSQSYV LTKGWSRFVK EKGLRAGDVL TFQRSTAPEK LLFIDRKTRA LGRHAAAGVQ  300
APRLPVEVVR LFGVDIVKMP VAVANDVTEG NGVDWNGKRT RDMELVSSRE LLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68840.2	1e-127	RAV family protein