PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83553.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C3H

Protein Properties

Length: 358aa MW: 40579.4 Da PI: 6.2812

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	20.3	9.8e-07	200	222	4	27
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 + C+++++ G+Ck G +C+F Hg+ RWV83553.1 200 RACHYYSK-GYCKNGINCRFFHGQ 222 68****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MLFSELCDRN LEMEVADCTN IVINRIQKLE PENAMKLIGY LLLKHTDQEI IEFAFGSDSQ 60 ILSLVDQAKA YLPLLQKSNI ACPMQHLDDQ KLHYMSLYPT VSLPFSSPSS FSIPAPLSDP 120 HQQSYQMPIS QNLDFPPSSY TDLIGGLYNQ AEELSLVDHL HPSCPDYLRN KCFSEVAFDR 180 GLSSRINMRL HPGWLESPPR ACHYYSKGYC KNGINCRFFH GQTNLDGFSD THNPRLNEVG 240 KEDQVSAPGS FAKLELEIIE LLKSKRGAPI SLASLPTMYL ERYGKMLQAD GYLTESQRHG 300 NVGFSLTNLL NQLNNSIQLI DRYIIALPRF LFFLPDACST MFLLKEPSPN AWKVRIYG

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MLFSELCDRN LEMEVADCTN IVINRIQKLE PENAMKLIGY LLLKHTDQEI IEFAFGSDSQ  60
ILSLVDQAKA YLPLLQKSNI ACPMQHLDDQ KLHYMSLYPT VSLPFSSPSS FSIPAPLSDP  120
HQQSYQMPIS QNLDFPPSSY TDLIGGLYNQ AEELSLVDHL HPSCPDYLRN KCFSEVAFDR  180
GLSSRINMRL HPGWLESPPR ACHYYSKGYC KNGINCRFFH GQTNLDGFSD THNPRLNEVG  240
KEDQVSAPGS FAKLELEIIE LLKSKRGAPI SLASLPTMYL ERYGKMLQAD GYLTESQRHG  300
NVGFSLTNLL NQLNNSIQLI DRYIIALPRF LFFLPDACST MFLLKEPSPN AWKVRIYG