PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV83436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 409aa MW: 43912 Da PI: 4.3265 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 40 | 7.7e-13 | 236 | 269 | 26 | 59 |
EE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 26 rCtsagCpvkkkversaedpkvveitYegeHnhe 59 +C+s+gC+++k+vers+ dp ++ itY+ eHnh+ RWV83436.1 236 KCSSKGCQARKQVERSSADPGMLLITYTAEHNHP 269 9********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence |
MAAVSRDMTL AISSSGACAM NGGVEVCASV PVSFRILAEG RGFRRRDGLL QQSTPPTSPL 60 LFLLLDPLVS RFMDDNNWDL YAVVRGCSAG AAPPVNDPYF SSFSLSDNDD VDGEMERLLG 120 FPELMGTSSY LCELQQLCQP FYAMEPDEEP LQQQQLPPLL APAASLLPAV AYSGQSQQQS 180 SQSPRTVSQP SRSKRRYFSL STPLPVSFLL SDSSYGETEL VTCGDVASAG RISRRKCSSK 240 GCQARKQVER SSADPGMLLI TYTAEHNHPI PTHRSSLAGS TRQKLPQPAA KGGDRDQLPS 300 PGHPSSSSPL PSPIAAAGLS PKTPLTEDDR KGEEGEEEDE ESPTMGNIDM LEEDSALFLG 360 MEVLVQPSPT GATETPATAT LSSGYFDEGS SFEDLFFRSQ WLAITDAAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 1e-19 | WRKY family protein |