PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83333.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MIKC_MADS

Protein Properties

Length: 201aa MW: 22929.2 Da PI: 6.3963

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.8	5.7e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvtfskRr g+lKKA+EL vLCda+v viifss+gk++ey+s RWV83333.1 9 KRIENPTNRQVTFSKRRGGLLKKANELAVLCDAQVGVIIFSSSGKMFEYCS 59 79***********************************************96 PP
2	K-box	46.4	1.7e-16	80	142	20	82
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqk 82 e+a++k+e ++Lq++ ++++Ge+L+ L+l+eL+qLe++Le+s++k+R +K + +e++q RWV83333.1 80 EIARIKDEKDKLQESMKQYVGENLTCLTLNELNQLEEELESSVNKVRVRKLSEHQAALEHTQA 142 99************************************************8888888888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MGRGKIEIKR IENPTNRQVT FSKRRGGLLK KANELAVLCD AQVGVIIFSS SGKMFEYCSP 60 HSSLSEIFVL CFPLQLIFYE IARIKDEKDK LQESMKQYVG ENLTCLTLNE LNQLEEELES 120 SVNKVRVRKL SEHQAALEHT QAAMEHKVGD MPMLEHLENY YSGEPSGSLL QLSPQTHAFR 180 LQPTQPNLQE DSLQGHNLQL W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	7e-34	MIKC_MADS family protein